[SCIP] SCIP and SoPlex not working in Mac OS X (10.8.5), only ZIMPL is working for both version 3.2.0 and 3..1.1

Noli Sicad nsicad at gmail.com
Sun Mar 6 11:59:44 CET 2016 

I got also same problem with soplex-2.0.1


Running tool: SoPlex OK

SoPlex version 2.0.1 [mode: optimized] [precision: 8 byte] [rational:
GMP 5.0.5] [githash: 51184cf]
Copyright (c) 1996-2014 Konrad-Zuse-Zentrum fuer Informationstechnik
Berlin (ZIB)

missing input file

dyld: lazy symbol binding failed: Symbol not found: ___emutls_get_address
  Referenced from: /usr/local/lib/libstdc++.6.dylib
  Expected in: /usr/local/lib/libgcc_s.1.dylib

dyld: Symbol not found: ___emutls_get_address
  Referenced from: /usr/local/lib/libstdc++.6.dylib
  Expected in: /usr/local/lib/libgcc_s.1.dylib

/Users/nsicad/.config/gedit/tools/soplex-ok: line 11: 51324 Trace/BPT
trap: 5       /Users/nsicad/Documents/A_Documents_28/SCIP/scipoptsuite-3.1.1/soplex-2.0.1/bin/soplex

Exited: 34048

On 3/6/16, Noli Sicad <nsicad at gmail.com> wrote:
> Hi,
>
> It seems that  scip is running. But not soplex. I got errors.
>
> Noli
>
> ~~~~~~~~~~~~~~~
>
> Running tool: SCIP
>
> SCIP version 3.2.1 [precision: 8 byte] [memory: block] [mode:
> optimized] [LP solver: SoPlex 2.2.1] [GitHash: c7c6c02]
> Copyright (c) 2002-2016 Konrad-Zuse-Zentrum fuer Informationstechnik
> Berlin (ZIB)
>
> External codes:
>   Readline EditLine w  GNU library for command line editing
> (gnu.org/s/readline)
>   SoPlex 2.2.1         Linear Programming Solver developed at Zuse
> Institute Berlin (soplex.zib.de) [GitHash: 267a44a]
>   cppad-20140000.3     Algorithmic Differentiation of C++ algorithms
> developed by B. Bell (www.coin-or.org/CppAD)
>   ZLIB 1.2.7           General purpose compression library by J.
> Gailly and M. Adler (zlib.net)
>   GMP 5.0.5            GNU Multiple Precision Arithmetic Library
> developed by T. Granlund (gmplib.org)
>   ZIMPL 3.3.3          Zuse Institute Mathematical Programming
> Language developed by T. Koch (zimpl.zib.de)
>
> user parameter file <scip.set> not found - using default parameters
>
>
> Done.
>
> ~~~~~~~~~
>
> I got this error in SoPlex
>
> ~~~~~~~
>
> Running tool: A SoPlex
>
> SoPlex version 2.2.1 [mode: optimized] [precision: 8 byte] [rational:
> GMP 5.0.5] [githash: 267a44a]
> Copyright (c) 1996-2016 Konrad-Zuse-Zentrum fuer Informationstechnik
> Berlin (ZIB)
>
> invalid option "dyld: lazy symbol binding failed: Symbol not found:
> ___emutls_get_address
>   Referenced from: /usr/local/lib/libstdc++.6.dylib
>   Expected in: /usr/local/lib/libgcc_s.1.dylib
>
> dyld: Symbol not found: ___emutls_get_address
>   Referenced from: /usr/local/lib/libstdc++.6.dylib
>   Expected in: /usr/local/lib/libgcc_s.1.dylib
>
> /Users/nsicad/.config/gedit/tools/soplex: line 9: 51300 Trace/BPT
> trap: 5
> /Users/nsicad/Documents/A_Documents_28/SCIP/scipoptsuite-3.2.1/soplex-2.2.1/bin/soplex
> -h
>
> Exited: 34048
>
>
>
> On 3/6/16, Noli Sicad <nsicad at gmail.com> wrote:
>> Hi  Jakob,
>>
>> OK. You are right. I tried the putting the whole path in Gedit.
>>
>> It works.
>>
>> This is the result
>>
>> ~~~~~~~~~~~~~~~~~~
>>
>> Running tool: SCIP
>>
>> invalid parameter <-h>
>>
>> syntax:
>> /Users/nsicad/Documents/A_Documents_28/SCIP/scipoptsuite-3.2.1/scip-3.2.1/bin/scip
>> [-l <logfile>] [-q] [-s <settings>] [-f <problem>] [-b <batchfile>]
>> [-c "command"]
>>   -l <logfile>  : copy output into log file
>>   -q            : suppress screen messages
>>   -s <settings> : load parameter settings (.set) file
>>   -f <problem>  : load and solve problem file
>>   -b <batchfile>: load and execute dialog command batch file (can be
>> used multiple times)
>>   -c "command"  : execute single line of dialog commands (can be used
>> multiple times)
>>
>> ~~~~~~~~~~
>>
>> OK. I have to put the whole path of the binary of scip and soplex.
>> However, in zimpl, not need to put the whole path.
>>
>> Thanks,
>>
>> Noli
>>
>>
>>
>>
>>
>> On 3/6/16, Jakob Witzig <witzig at zib.de> wrote:
>>> Hi Noli,
>>>
>>> have you tried to execute soplex.darvin.* ? Please check with 'ls -l' to
>>> which binary scip and soplex is linked, resp.
>>>
>>> Cheers,
>>> Jakob
>>>
>>> On 06.03.2016 11:17, Noli Sicad wrote:
>>>> Hi Jakob,
>>>>
>>>> I open a terminal app and run the scip binary.
>>>>
>>>> This is log and error in scip/bin directory
>>>> ~~~~~~
>>>> bash-3.2$ ls
>>>> scip					scip.darwin.x86_64.gnu.opt.spx
>>>> scip-3.2.1.darwin.x86_64.gnu.opt.spx
>>>> bash-3.2$ scip
>>>> bash: scip: command not found
>>>>
>>>> I did the same in the Soplex
>>>> ~~~~~~
>>>> Nolis-MacBook-Pro:bin nsicad$ bash
>>>> bash-3.2$ ls
>>>> soplex					soplex.darwin.x86_64.gnu.opt
>>>> soplex-2.2.1.darwin.x86_64.gnu.opt
>>>> bash-3.2$ soplex
>>>> bash: soplex: command not found
>>>> bash-3.2$
>>>> ~~~~~~~~~
>>>>
>>>> I did the same in the zimpl bin directory
>>>> ~~~~~~~~~
>>>> Nolis-MacBook-Pro:bin nsicad$ bash
>>>> bash-3.2$ ls
>>>> zimpl
>>>> zimpl-3.3.3.darwin.x86_64.gnu.normal.opt
>>>> zimpl.darwin.x86_64.gnu.opt
>>>> bash-3.2$ zimpl
>>>> usage: zimpl [options] file ...
>>>> bash-3.2$ zimpl -h
>>>> ****************************************************
>>>> * Zuse Institute Mathematical Programming Language *
>>>> * Release 3.3.0 Copyright (C)2012 by Thorsten Koch *
>>>> ****************************************************
>>>> *   This is free software and you are welcome to   *
>>>> *     redistribute it under certain conditions     *
>>>> *      ZIMPL comes with ABSOLUTELY NO WARRANTY     *
>>>> ****************************************************
>>>>
>>>> usage: zimpl [options] file ...
>>>>
>>>>    -b             enable bison debugging output.
>>>>    -D name=value  assign value to parameter name.
>>>>    -f             enable flex debugging output.
>>>> .
>>>> .
>>>> ~~~~~~~
>>>>
>>>> As you can see the zimpl is working but not the scip and soplex.
>>>>
>>>> Noli
>>>>
>>>>
>>>> On 3/6/16, Jakob Witzig <witzig at zib.de> wrote:
>>>>> Hi Noli,
>>>>>
>>>>> if you have not added the location of the SCIP binary to your library
>>>>> path, you have to execute SCIP with /some_path/your_scip_dir/bin/scip.
>>>>>
>>>>> Cheers,
>>>>> Jakob
>>>
>>> --
>>> Jakob Witzig
>>>
>>> Zuse Institute Berlin (ZIB)
>>>
>>> Division Mathematical Optimization and Scientific Information
>>> Research Group Mathematical Optimization Methods
>>>
>>> Takustrasse 7
>>> 14195 Berlin
>>>
>>> Tel. : +49 (0)30 84185-416
>>> Fax  : +49 (0)30 84185-269
>>> email: witzig at zib.de
>>>
>>>
>>
>

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